Publications

Coordinate: An Android application to organize samples into grids

Year: 2025 DOI:10.21105/joss.08263

Authors: Rife, Trevor W. Courtney, Chaney Kamath, Prasad Ellerbrock, Bryan Poland, Jesse

Saltgrass genomes reveal unique features of a dioecious, perennial, halophytic grass

Scientific Research Year: 2024 DOI:https://doi.org/10.21203/rs.3.rs-4844604/v1

Authors: Poland, J., Nawaz, K., Orduna, I. O., Koo, D., Molina-Freaner, F., Bell, H., Miculan, M., Llaca, V., Harrington, J., & Eppley, S.

genomic structure
Halophyte
neodomestication
chromosome fusion
dioecy
sex determining region

Implementing multi-trait genomic selection to improve grain milling quality in oats (Avena sativa L.)

Year: 2024 DOI:10.1002/tpg2.20457

Authors: Dhakal, Anup Poland, Jesse Adhikari, LaxmanFaryna, Ethan Fiedler, Jason Rutkoski, Jessica E. Arbelaez, Juan David

oats
Milling quality
Test weight
Multi-trait genomic selection (MTGS)
Genetic gain
Breeding program
Kernel morphometric traits

Identifying novel sources of resistance to wheat stem sawfly in five wild wheat species

Scientific Research Year: 2024 DOI:https://doi.org/10.1002/ps.8008

Authors: Erika S Peirce, Byron Evers, Zachary J Winn, W John Raupp, Mary Guttieri, Allan K Fritz, Jesse Poland, Eduard Akhunov, Scott Haley, Esten Mason, Punya Nachappa

host plant resistance
Cephus cinctus
genetic diversity
phylogenetic analysis
hollow stem

Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons

Scientific Research Year: 2024 DOI:https://doi.org/10.1186/s13100-024-00326-9

Authors: Matthias Heuberger, Dal-Hoe Koo, Hanin Ibrahim Ahmed, Vijay K. Tiwari, Michael Abrouk, Jesse Poland, Simon G. Krattinger & Thomas Wicker

Centromere evolution
Transposable element population genetics
Centromere stability

Wheat genomics: genomes, pangenomes, and beyond

Scientific Research Year: 2024

Authors: Vijay K Tiwari, Gautam Saripalli, Parva K Sharma, Jesse Poland

Wheat
genes
IWGSC
genomes
pangemoes

Dissecting the Population Structure, Diversity and Genetic Architecture of Disease Resistance in Wild Emmer Wheat (Triticum turgidum subsp. dicoccoides)

Scientific Research Year: 2024 DOI:10.21203/rs.3.rs-4909521/v1

Authors: Adhikari, L., Olivera, P., Yu, G., Raupp, J., Sela, H., Distelfeld, A., Wulff, B., Steffenson, B., & Poland, J.

Wild Emmer Wheat, dicoccoides, whole-genome sequencing, population structure, GWAS, stem rust, leaf rust, stripe rust, judaicum

QTL mapping of stem rust resistance in a Bill Brown/Gage winter wheat population

Scientific Research Year: 2025 DOI:10.1002/csc2.21445

Authors: Kumssa, T. T., Baenziger, P. S., Rouse, M. N., Hussain, W., Belamkar, V., Wegulo, S. N., & Poland, J.

Einkorn genomics sheds light on history of the oldest domesticated wheat

Scientific Research Year: 2023 DOI:https://doi.org/10.1038/s41586-023-06389-7

Authors: Hanin Ibrahim Ahmed, Matthias Heuberger, Adam Schoen, Dal-Hoe Koo, Jesus Quiroz-Chavez, Laxman Adhikari, John Raupp, Stéphane Cauet, Nathalie Rodde, Charlotte Cravero, Caroline Callot, Gerard R. Lazo, Nagarajan Kathiresan, Parva K. Sharma, Ian Moot, Inderjit Singh Yadav, Lovepreet Singh, Gautam Saripalli, Nidhi Rawat, Raju Datla, Naveenkumar Athiyannan, Ricardo H. Ramirez-Gonzalez, Cristobal Uauy, Thomas Wicker, Vijay K. Tiwari, Michael Abrouk, Jesse A. Poland, Simon G. Krattinger

Einkorn wheat
genomics
domesticated wheat

A high-throughput skim-sequencing approach for genotyping, dosage estimation and identifying translocations

Scientific Research Year: 2022 DOI:https://doi.org/10.1038/s41598-022-19858-2

Authors: Laxman Adhikari, Sandesh Shrestha, Shuangye Wu, Jared Crain, Liangliang Gao, Byron Evers, Duane Wilson, Yoonha Ju, Dal-Hoe Koo, Pierre Hucl, Curtis Pozniak, Sean Walkowiak, Xiaoyun Wang, Jing Wu, Jeffrey C. Glaubitz, Lee DeHaan, Bernd Friebe, Jesse A. Poland

high-throughput phenotyping
skim-sequencing
genotyping

Publications

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